CRISPRone

CRISPRone report for SRR9713391

♦ Seq 1: NODE_385_length_3987_cov_3.553662

⇒Summary: seq-len = 3987 bp; # of CRISPR array = 0; # of cas gene = 3  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-3448 bp Zoom in on locus 1 Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 3-239 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 232-2034 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 2039-3448 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_177_length_8865_cov_4.005448

⇒Summary: seq-len = 8865 bp; # of CRISPR array = 1; # of cas gene = 5  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1756-8863 bp Zoom in on locus 1 x14 CRISPR array Location: 1756-2710 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 1756-2710 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09634:cas1 Type: universal Location: 3442-5712 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 5732-6676 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 6679-7089 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 7102-7941 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 7961-8863 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1756-2710 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_91_length_15039_cov_4.275961

⇒Summary: seq-len = 15039 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 5612-9225 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 5612-6511 bp Gene: unk Type: unknown Location: 6508-7773 bp Gene: unk Type: unknown Location: 7781-8554 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 8557-9225 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)