CRISPRone

CRISPRone report for SRR9713399

♦ Seq 1: NODE_121_length_420_cov_7.958904

⇒Summary: seq-len = 420 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16-409 bp Zoom in on locus 1 x6 CRISPR array Location: 16-409 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 16-409 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 16-409 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_13_length_108704_cov_10.062817

⇒Summary: seq-len = 108704 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 94695-108702 bp Zoom in on locus 1 x5 Gene: cls000004:cas6 Type: other Location: 94695-95426 bp Gene: unk Type: unknown Location: 95444-96070 bp Gene: unk Type: unknown Location: 96046-96825 bp Gene: cash17:cash17 Type: Type- Location: 96870-98297 bp Gene: unk Type: unknown Location: 98294-98773 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 98787-100196 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 100201-102003 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 101996-103135 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 103155-103994 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 104007-104417 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 104414-105364 bp Gene: cd09634:cas1 Type: universal Location: 105384-107654 bp Gene: cd09725:cas2 Type: universal Location: 107648-107938 bp CRISPR array Location: 108386-108702 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 108386-108702 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 108386-108702 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_52_length_31947_cov_10.022200

⇒Summary: seq-len = 31947 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-311 bp Zoom in on locus 1 x5 CRISPR array Location: 0-311 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 0-311 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-311 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NODE_7_length_157554_cov_11.168376

⇒Summary: seq-len = 157554 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 10078-13691 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 10078-10977 bp Gene: unk Type: unknown Location: 10974-12239 bp Gene: unk Type: unknown Location: 12247-13020 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 13023-13691 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)