CRISPRone

CRISPRone report for SRR9713420

♦ Seq 1: NODE_76_length_9014_cov_10.249358

⇒Summary: seq-len = 9014 bp; # of CRISPR array = 0; # of cas gene = 7  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-8657 bp Zoom in on locus 1 Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 3-1199 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 1204-3006 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 2999-4138 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4158-4997 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 5010-5420 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 5423-6367 bp Gene: cd09634:cas1 Type: universal Location: 6387-8657 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_3_length_227948_cov_34.594564

⇒Summary: seq-len = 227948 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 140464-144077 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 140464-141132 bp Gene: unk Type: unknown Location: 141135-141908 bp Gene: unk Type: unknown Location: 141916-143181 bp Gene: pfam13280:WYL Type: other Location: 143178-144077 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_52_length_32594_cov_24.211930

⇒Summary: seq-len = 32594 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-958 bp Zoom in on locus 1 x14 CRISPR array Location: 3-958 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 3-958 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 3-958 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)