CRISPRone

CRISPRone report for SRR9713422

♦ Seq 1: NODE_23_length_84428_cov_26.215970

⇒Summary: seq-len = 84428 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38151-52797 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 38151-38882 bp Gene: unk Type: unknown Location: 38900-39526 bp Gene: unk Type: unknown Location: 39502-40281 bp Gene: cash17:cash17 Type: Type- Location: 40326-41753 bp Gene: unk Type: unknown Location: 41750-42229 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 42243-43652 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 43657-45459 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 45452-46591 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 46611-47450 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 47463-47873 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 47870-48820 bp Gene: cd09634:cas1 Type: universal Location: 48840-51110 bp Gene: cd09725:cas2 Type: universal Location: 51104-51394 bp CRISPR array Location: 51842-52797 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 51842-52797 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 51842-52797 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_3_length_231912_cov_37.928917

⇒Summary: seq-len = 231912 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 83872-87485 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 83872-84771 bp Gene: unk Type: unknown Location: 84768-86033 bp Gene: unk Type: unknown Location: 86041-86814 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 86817-87485 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)