CRISPRone

CRISPRone report for SRR9713430

♦ Seq 1: NODE_2_length_411744_cov_8.302828

⇒Summary: seq-len = 411744 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 264541-268154 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 264541-265440 bp Gene: unk Type: unknown Location: 265437-266702 bp Gene: unk Type: unknown Location: 266710-267483 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 267486-268154 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_3_length_362936_cov_7.499431

⇒Summary: seq-len = 362936 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 316659-331305 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 316659-317390 bp Gene: unk Type: unknown Location: 317408-318034 bp Gene: unk Type: unknown Location: 318010-318789 bp Gene: cash17:cash17 Type: Type- Location: 318834-320261 bp Gene: unk Type: unknown Location: 320258-320737 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 320751-322160 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 322165-323967 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 323960-325099 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 325119-325958 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 325971-326381 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 326378-327328 bp Gene: cd09634:cas1 Type: universal Location: 327348-329618 bp Gene: cd09725:cas2 Type: universal Location: 329612-329902 bp CRISPR array Location: 330350-331305 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 330350-331305 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 330350-331305 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)