CRISPRone

CRISPRone report for SRR9713431

♦ Seq 1: NODE_5_length_229740_cov_9.007789

⇒Summary: seq-len = 229740 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 81700-85313 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 81700-82599 bp Gene: unk Type: unknown Location: 82596-83861 bp Gene: unk Type: unknown Location: 83869-84642 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 84645-85313 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_19_length_91390_cov_8.077583

⇒Summary: seq-len = 91390 bp; # of CRISPR array = 1; # of cas gene = 11  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 45113-59759 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 45113-45844 bp Gene: unk Type: unknown Location: 45862-46488 bp Gene: unk Type: unknown Location: 46464-47243 bp Gene: cash17:cash17 Type: Type- Location: 47288-48715 bp Gene: unk Type: unknown Location: 48712-49191 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 49205-50614 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 50619-50963 bp Gene: cls000742:cas10 Type: Type-III Location: 51105-52421 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 52414-53553 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 53573-54412 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 54425-54835 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 54832-55782 bp Gene: cd09634:cas1 Type: universal Location: 55802-58072 bp Gene: cd09725:cas2 Type: universal Location: 58066-58356 bp CRISPR array Location: 58804-59759 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 58804-59759 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 58804-59759 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)