CRISPRone

CRISPRone report for SRR9713432

♦ Seq 1: NODE_15_length_143189_cov_7.997708

⇒Summary: seq-len = 143189 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 96912-111558 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 96912-97643 bp Gene: unk Type: unknown Location: 97661-98287 bp Gene: unk Type: unknown Location: 98263-99042 bp Gene: cash17:cash17 Type: Type- Location: 99087-100514 bp Gene: unk Type: unknown Location: 100511-100990 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 101004-102413 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 102418-104220 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 104213-105352 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 105372-106211 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 106224-106634 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 106631-107581 bp Gene: cd09634:cas1 Type: universal Location: 107601-109871 bp Gene: cd09725:cas2 Type: universal Location: 109865-110155 bp CRISPR array Location: 110603-111558 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 110603-111558 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 110603-111558 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_3_length_368820_cov_9.100254

⇒Summary: seq-len = 368820 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 144392-148005 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 144392-145060 bp Gene: unk Type: unknown Location: 145063-145836 bp Gene: unk Type: unknown Location: 145844-147109 bp Gene: pfam13280:WYL Type: other Location: 147106-148005 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)