CRISPRone

CRISPRone report for SRR9713438

♦ Seq 1: NODE_2_length_454277_cov_14.531337

⇒Summary: seq-len = 454277 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 104090-107703 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 104090-104758 bp Gene: unk Type: unknown Location: 104761-105534 bp Gene: unk Type: unknown Location: 105542-106807 bp Gene: pfam13280:WYL Type: other Location: 106804-107703 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_3_length_328109_cov_12.991358

⇒Summary: seq-len = 328109 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 282493-297131 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 282493-283224 bp Gene: unk Type: unknown Location: 283242-283868 bp Gene: unk Type: unknown Location: 283844-284623 bp Gene: cash17:cash17 Type: Type- Location: 284668-286095 bp Gene: unk Type: unknown Location: 286092-286571 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 286585-287994 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 287999-289801 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 289794-290933 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 290953-291792 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 291805-292215 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 292212-293162 bp Gene: cd09634:cas1 Type: universal Location: 293182-295452 bp Gene: cd09725:cas2 Type: universal Location: 295446-295736 bp CRISPR array Location: 296184-297131 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 296184-297131 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 296184-297131 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)