CRISPRone

CRISPRone report for SRR9713441

♦ Seq 1: NODE_4_length_366820_cov_11.145363

⇒Summary: seq-len = 366820 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 217312-220925 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 217312-218211 bp Gene: unk Type: unknown Location: 218208-219473 bp Gene: unk Type: unknown Location: 219481-220254 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 220257-220925 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_5_length_364817_cov_9.609389

⇒Summary: seq-len = 364817 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 318535-333181 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 318535-319266 bp Gene: unk Type: unknown Location: 319284-319910 bp Gene: unk Type: unknown Location: 319886-320665 bp Gene: cash17:cash17 Type: Type- Location: 320710-322137 bp Gene: unk Type: unknown Location: 322134-322613 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 322627-324036 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 324041-325843 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 325836-326975 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 326995-327834 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 327847-328257 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 328254-329204 bp Gene: cd09634:cas1 Type: universal Location: 329224-331494 bp Gene: cd09725:cas2 Type: universal Location: 331488-331778 bp CRISPR array Location: 332226-333181 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 332226-333181 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 332226-333181 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)