CRISPRone

CRISPRone report for SRR9713442

♦ Seq 1: NODE_12_length_175884_cov_8.931183

⇒Summary: seq-len = 175884 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 90574-94187 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 90574-91242 bp Gene: unk Type: unknown Location: 91245-92018 bp Gene: unk Type: unknown Location: 92026-93291 bp Gene: pfam13280:WYL Type: other Location: 93288-94187 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_15_length_117421_cov_8.186102

⇒Summary: seq-len = 117421 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 71144-85790 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 71144-71875 bp Gene: unk Type: unknown Location: 71893-72519 bp Gene: unk Type: unknown Location: 72495-73274 bp Gene: cash17:cash17 Type: Type- Location: 73319-74746 bp Gene: unk Type: unknown Location: 74743-75222 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 75236-76645 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 76650-78452 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 78445-79584 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 79604-80443 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 80456-80866 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 80863-81813 bp Gene: cd09634:cas1 Type: universal Location: 81833-84103 bp Gene: cd09725:cas2 Type: universal Location: 84097-84387 bp CRISPR array Location: 84835-85790 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 84835-85790 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 84835-85790 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)