CRISPRone

CRISPRone report for SRR9713444

♦ Seq 1: NODE_2_length_524673_cov_11.232238

⇒Summary: seq-len = 524673 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 376633-380246 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 376633-377532 bp Gene: unk Type: unknown Location: 377529-378794 bp Gene: unk Type: unknown Location: 378802-379575 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 379578-380246 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_3_length_499222_cov_10.040403

⇒Summary: seq-len = 499222 bp; # of CRISPR array = 1; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 134359-148941 bp Zoom in on locus 1 x14 CRISPR array Location: 134359-135313 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 134359-135313 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09634:cas1 Type: universal Location: 136045-138315 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 138335-139285 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 139282-139692 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 139705-140544 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 140564-141703 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 141696-143498 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 143503-144912 bp Gene: unk Type: unknown Location: 144926-145405 bp Gene: cash17:cash17 Type: Type- Location: 145402-146829 bp Gene: unk Type: unknown Location: 146874-147653 bp Gene: unk Type: unknown Location: 147629-148255 bp Gene: cls000004:cas6 Type: other Location: 148273-148941 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 134359-135313 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)