CRISPRone

CRISPRone report for SRR9713446

♦ Seq 1: NODE_50_length_32626_cov_7.288170

⇒Summary: seq-len = 32626 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31633-32587 bp Zoom in on locus 1 x14 CRISPR array Location: 31633-32587 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 31633-32587 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 31633-32587 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_1_length_524201_cov_7.783326

⇒Summary: seq-len = 524201 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 376998-380611 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 376998-377897 bp Gene: unk Type: unknown Location: 377894-379159 bp Gene: unk Type: unknown Location: 379167-379940 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 379943-380611 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_43_length_37653_cov_6.991622

⇒Summary: seq-len = 37653 bp; # of CRISPR array = 0; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 23990-37233 bp Zoom in on locus 1 Gene: cls000004:cas6 Type: other Location: 23990-24721 bp Gene: unk Type: unknown Location: 24739-25365 bp Gene: unk Type: unknown Location: 25341-26120 bp Gene: cash17:cash17 Type: Type- Location: 26165-27592 bp Gene: unk Type: unknown Location: 27589-28068 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 28082-29491 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 29496-31298 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 31291-32430 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 32450-33289 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 33302-33712 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 33709-34659 bp Gene: cd09634:cas1 Type: universal Location: 34679-36949 bp Gene: cd09725:cas2 Type: universal Location: 36943-37233 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)