CRISPRone

CRISPRone report for SRR9713447

♦ Seq 1: NODE_9_length_156528_cov_9.345146

⇒Summary: seq-len = 156528 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 127754-131367 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 127754-128653 bp Gene: unk Type: unknown Location: 128650-129915 bp Gene: unk Type: unknown Location: 129923-130696 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 130699-131367 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_13_length_139054_cov_8.547090

⇒Summary: seq-len = 139054 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 92777-107423 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 92777-93508 bp Gene: unk Type: unknown Location: 93526-94152 bp Gene: unk Type: unknown Location: 94128-94907 bp Gene: cash17:cash17 Type: Type- Location: 94952-96379 bp Gene: unk Type: unknown Location: 96376-96855 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 96869-98278 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 98283-100085 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 100078-101217 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 101237-102076 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 102089-102499 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 102496-103446 bp Gene: cd09634:cas1 Type: universal Location: 103466-105736 bp Gene: cd09725:cas2 Type: universal Location: 105730-106020 bp CRISPR array Location: 106468-107423 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 106468-107423 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 106468-107423 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)