CRISPRone

CRISPRone report for SRR9713460

♦ Seq 1: NODE_4_length_231998_cov_49.407717

⇒Summary: seq-len = 231998 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 83958-87571 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 83958-84857 bp Gene: unk Type: unknown Location: 84854-86119 bp Gene: unk Type: unknown Location: 86127-86900 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 86903-87571 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_68_length_8698_cov_16.089205

⇒Summary: seq-len = 8698 bp; # of CRISPR array = 0; # of cas gene = 7  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 455-8695 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 455-2725 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2745-3689 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3692-4102 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4115-4954 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 4974-6113 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6106-7908 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 7913-8695 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_46_length_32872_cov_36.405643

⇒Summary: seq-len = 32872 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 286-1241 bp Zoom in on locus 1 x14 CRISPR array Location: 286-1241 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 286-1241 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 286-1241 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)