CRISPRone

CRISPRone report for SRR9713462

♦ Seq 1: NODE_94_length_7688_cov_11.642080

⇒Summary: seq-len = 7688 bp; # of CRISPR array = 0; # of cas gene = 6  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-7329 bp Zoom in on locus 1 Gene: cls000742:cas10 Type: Type-III Location: 2-1678 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 1671-2810 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2830-3669 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3682-4092 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4095-5039 bp Gene: cd09634:cas1 Type: universal Location: 5059-7329 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_6_length_162920_cov_33.517373

⇒Summary: seq-len = 162920 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 81693-85306 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 81693-82592 bp Gene: unk Type: unknown Location: 82589-83854 bp Gene: unk Type: unknown Location: 83862-84635 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 84638-85306 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_58_length_32862_cov_22.228976

⇒Summary: seq-len = 32862 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31633-32587 bp Zoom in on locus 1 x14 CRISPR array Location: 31633-32587 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 31633-32587 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 31633-32587 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)