CRISPRone

CRISPRone report for SRR9713465

♦ Seq 1: NODE_546_length_1756_cov_3.682540

⇒Summary: seq-len = 1756 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 587-1753 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 587-1753 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_596_length_1281_cov_5.503263

⇒Summary: seq-len = 1281 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 321-1275 bp Zoom in on locus 1 x14 CRISPR array Location: 321-1275 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 321-1275 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 321-1275 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_11_length_38080_cov_5.387324

⇒Summary: seq-len = 38080 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 649-4262 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 649-1317 bp Gene: unk Type: unknown Location: 1320-2093 bp Gene: unk Type: unknown Location: 2101-3366 bp Gene: pfam13280:WYL Type: other Location: 3363-4262 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NODE_267_length_6355_cov_5.203333

⇒Summary: seq-len = 6355 bp; # of CRISPR array = 0; # of cas gene = 6  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 67-6353 bp Zoom in on locus 1 Gene: pfam12469:cas10 Type: Subtype-III-B Location: 67-1869 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 1862-3001 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 3021-3860 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3873-4283 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4280-5230 bp Gene: pfam00078:RT Type: other Location: 5250-6353 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: NODE_99_length_13862_cov_4.515825

⇒Summary: seq-len = 13862 bp; # of CRISPR array = 0; # of cas gene = 3  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-5386 bp Zoom in on locus 1 Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 2-1357 bp Gene: unk Type: unknown Location: 1371-1850 bp Gene: cash17:cash17 Type: Type- Location: 1847-3274 bp Gene: unk Type: unknown Location: 3319-4098 bp Gene: unk Type: unknown Location: 4074-4700 bp Gene: cls000004:cas6 Type: other Location: 4718-5386 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)