CRISPRone

CRISPRone report for SRR9713472

♦ Seq 1: NODE_4_length_228346_cov_5.598057

⇒Summary: seq-len = 228346 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 129354-139072 bp Zoom in on locus 1 Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 129354-130604 bp Gene: unk Type: unknown Location: 130639-130800 bp Gene: unk Type: unknown Location: 130941-131117 bp Gene: pfam13280:WYL Type: other Location: 131883-132893 bp Gene: cd09710:cas3 Type: Subtype-I-D Location: 132932-139072 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_29_length_66454_cov_6.250501

⇒Summary: seq-len = 66454 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 56946-65174 bp Zoom in on locus 1 x20 Gene: cd09643:cas9 Type: Subtype-II-C Location: 56946-61256 bp Gene: unk Type: unknown Location: 61272-61796 bp Gene: unk Type: unknown Location: 61863-62171 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 62291-63223 bp Gene: pfam09827:cas2 Type: Subtype-II-C Location: 63227-63559 bp CRISPR array Location: 63668-65174 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 63668-65174 bp Num of repeats: 20 Spacers: s1-s19 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 63668-65174 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_1_length_399301_cov_6.128137

⇒Summary: seq-len = 399301 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 272530-276143 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 272530-273429 bp Gene: unk Type: unknown Location: 273426-274691 bp Gene: unk Type: unknown Location: 274699-275472 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 275475-276143 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)