CRISPRone

CRISPRone report for SRR9713482

♦ Seq 1: NODE_7_length_245149_cov_7.821407

⇒Summary: seq-len = 245149 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 143591-147204 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 143591-144259 bp Gene: unk Type: unknown Location: 144262-145035 bp Gene: unk Type: unknown Location: 145043-146308 bp Gene: pfam13280:WYL Type: other Location: 146305-147204 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_6_length_250001_cov_7.552511

⇒Summary: seq-len = 250001 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 100906-115552 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 100906-101637 bp Gene: unk Type: unknown Location: 101655-102281 bp Gene: unk Type: unknown Location: 102257-103036 bp Gene: cash17:cash17 Type: Type- Location: 103081-104508 bp Gene: unk Type: unknown Location: 104505-104984 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 104998-106407 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 106412-108214 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 108207-109346 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 109366-110205 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 110218-110628 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 110625-111575 bp Gene: cd09634:cas1 Type: universal Location: 111595-113865 bp Gene: cd09725:cas2 Type: universal Location: 113859-114149 bp CRISPR array Location: 114597-115552 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 114597-115552 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 114597-115552 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)