CRISPRone

CRISPRone report for SRR9713483

♦ Seq 1: NODE_9_length_147206_cov_6.991798

⇒Summary: seq-len = 147206 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 100924-115570 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 100924-101655 bp Gene: unk Type: unknown Location: 101673-102299 bp Gene: unk Type: unknown Location: 102275-103054 bp Gene: cash17:cash17 Type: Type- Location: 103099-104526 bp Gene: unk Type: unknown Location: 104523-105002 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 105016-106425 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 106430-108232 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 108225-109364 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 109384-110223 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 110236-110646 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 110643-111593 bp Gene: cd09634:cas1 Type: universal Location: 111613-113883 bp Gene: cd09725:cas2 Type: universal Location: 113877-114167 bp CRISPR array Location: 114615-115570 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 114615-115570 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 114615-115570 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_1_length_539929_cov_8.037896

⇒Summary: seq-len = 539929 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 392726-396339 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 392726-393625 bp Gene: unk Type: unknown Location: 393622-394887 bp Gene: unk Type: unknown Location: 394895-395668 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 395671-396339 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)