CRISPRone

CRISPRone report for SRR9713488

♦ Seq 1: NODE_6_length_188323_cov_6.895590

⇒Summary: seq-len = 188323 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 143533-147146 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 143533-144201 bp Gene: unk Type: unknown Location: 144204-144977 bp Gene: unk Type: unknown Location: 144985-146250 bp Gene: pfam13280:WYL Type: other Location: 146247-147146 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_21_length_81020_cov_6.367455

⇒Summary: seq-len = 81020 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 34743-49389 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 34743-35474 bp Gene: unk Type: unknown Location: 35492-36118 bp Gene: unk Type: unknown Location: 36094-36873 bp Gene: cash17:cash17 Type: Type- Location: 36918-38345 bp Gene: unk Type: unknown Location: 38342-38821 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 38835-40244 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 40249-42051 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 42044-43183 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 43203-44042 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 44055-44465 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 44462-45412 bp Gene: cd09634:cas1 Type: universal Location: 45432-47702 bp Gene: cd09725:cas2 Type: universal Location: 47696-47986 bp CRISPR array Location: 48434-49389 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 48434-49389 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 48434-49389 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)