CRISPRone

CRISPRone report for SRR9713491

♦ Seq 1: NODE_5_length_218389_cov_7.031626

⇒Summary: seq-len = 218389 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 184060-187673 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 184060-184959 bp Gene: unk Type: unknown Location: 184956-186221 bp Gene: unk Type: unknown Location: 186229-187002 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 187005-187673 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_12_length_133897_cov_6.515877

⇒Summary: seq-len = 133897 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 87620-102266 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 87620-88351 bp Gene: unk Type: unknown Location: 88369-88995 bp Gene: unk Type: unknown Location: 88971-89750 bp Gene: cash17:cash17 Type: Type- Location: 89795-91222 bp Gene: unk Type: unknown Location: 91219-91698 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 91712-93121 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 93126-94928 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 94921-96060 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 96080-96919 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 96932-97342 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 97339-98289 bp Gene: cd09634:cas1 Type: universal Location: 98309-100579 bp Gene: cd09725:cas2 Type: universal Location: 100573-100863 bp CRISPR array Location: 101311-102266 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 101311-102266 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 101311-102266 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)