CRISPRone

CRISPRone report for SRR9713502

♦ Seq 1: NODE_7_length_223367_cov_23.150601

⇒Summary: seq-len = 223367 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 964-9191 bp Zoom in on locus 1 x20 CRISPR array Location: 964-2469 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 964-2469 bp Num of repeats: 20 Spacers: s1-s19 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 2578-2910 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 2914-3846 bp Gene: unk Type: unknown Location: 3966-4274 bp Gene: unk Type: unknown Location: 4341-4865 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 4881-9191 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 964-2469 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_6_length_281756_cov_20.442686

⇒Summary: seq-len = 281756 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 182764-192482 bp Zoom in on locus 1 Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 182764-184014 bp Gene: unk Type: unknown Location: 184049-184210 bp Gene: unk Type: unknown Location: 184351-184527 bp Gene: pfam13280:WYL Type: other Location: 185293-186303 bp Gene: cd09710:cas3 Type: Subtype-I-D Location: 186342-192482 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_5_length_327950_cov_20.925677

⇒Summary: seq-len = 327950 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 200807-204420 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 200807-201706 bp Gene: unk Type: unknown Location: 201703-202968 bp Gene: unk Type: unknown Location: 202976-203749 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 203752-204420 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)