CRISPRone

CRISPRone report for SRR9713513

♦ Seq 1: NODE_15_length_113149_cov_16.722877

⇒Summary: seq-len = 113149 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 66456-81507 bp Zoom in on locus 1 x20 Gene: cls000004:cas6 Type: other Location: 66456-67187 bp Gene: unk Type: unknown Location: 67205-67831 bp Gene: unk Type: unknown Location: 67807-68586 bp Gene: cash17:cash17 Type: Type- Location: 68631-70058 bp Gene: unk Type: unknown Location: 70055-70534 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 70548-71957 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 71962-73764 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 73757-74896 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 74916-75755 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 75768-76178 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 76175-77125 bp Gene: cd09634:cas1 Type: universal Location: 77145-79415 bp Gene: cd09725:cas2 Type: universal Location: 79409-79699 bp CRISPR array Location: 80147-81507 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 80147-81507 bp Num of repeats: 20 Spacers: s1-s19 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 80147-81507 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_4_length_444843_cov_19.486052

⇒Summary: seq-len = 444843 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 342108-345721 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 342108-343007 bp Gene: unk Type: unknown Location: 343004-344269 bp Gene: unk Type: unknown Location: 344277-345050 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 345053-345721 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)