CRISPRone

CRISPRone report for SRR9713518

♦ Seq 1: NODE_17_length_113011_cov_12.730515

⇒Summary: seq-len = 113011 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31644-46495 bp Zoom in on locus 1 x18 CRISPR array Location: 31644-32867 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 31644-32867 bp Num of repeats: 18 Spacers: s1-s17 Gene: cd09725:cas2 Type: universal Location: 33315-33605 bp Gene: cd09634:cas1 Type: universal Location: 33599-35869 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 35889-36839 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 36836-37246 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 37259-38098 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 38118-39257 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 39250-41052 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 41057-42466 bp Gene: unk Type: unknown Location: 42480-42959 bp Gene: cash17:cash17 Type: Type- Location: 42956-44383 bp Gene: unk Type: unknown Location: 44428-45207 bp Gene: unk Type: unknown Location: 45183-45809 bp Gene: cls000004:cas6 Type: other Location: 45827-46495 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 31644-32867 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_3_length_444843_cov_15.682575

⇒Summary: seq-len = 444843 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 342108-345721 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 342108-343007 bp Gene: unk Type: unknown Location: 343004-344269 bp Gene: unk Type: unknown Location: 344277-345050 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 345053-345721 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)