CRISPRone

CRISPRone report for SRR9713525

♦ Seq 1: NODE_2_length_524664_cov_10.979528

⇒Summary: seq-len = 524664 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 144428-148041 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 144428-145096 bp Gene: unk Type: unknown Location: 145099-145872 bp Gene: unk Type: unknown Location: 145880-147145 bp Gene: pfam13280:WYL Type: other Location: 147142-148041 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_15_length_97835_cov_9.321814

⇒Summary: seq-len = 97835 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 51553-66199 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 51553-52284 bp Gene: unk Type: unknown Location: 52302-52928 bp Gene: unk Type: unknown Location: 52904-53683 bp Gene: cash17:cash17 Type: Type- Location: 53728-55155 bp Gene: unk Type: unknown Location: 55152-55631 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 55645-57054 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 57059-58861 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 58854-59993 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 60013-60852 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 60865-61275 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 61272-62222 bp Gene: cd09634:cas1 Type: universal Location: 62242-64512 bp Gene: cd09725:cas2 Type: universal Location: 64506-64796 bp CRISPR array Location: 65244-66199 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 65244-66199 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 65244-66199 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)