CRISPRone

CRISPRone report for SRR9713526

♦ Seq 1: NODE_2_length_442432_cov_7.905456

⇒Summary: seq-len = 442432 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 294392-298005 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 294392-295291 bp Gene: unk Type: unknown Location: 295288-296553 bp Gene: unk Type: unknown Location: 296561-297334 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 297337-298005 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_46_length_32622_cov_7.121473

⇒Summary: seq-len = 32622 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31633-32587 bp Zoom in on locus 1 x14 CRISPR array Location: 31633-32587 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 31633-32587 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 31633-32587 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_11_length_125608_cov_7.144505

⇒Summary: seq-len = 125608 bp; # of CRISPR array = 0; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 707-13603 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 707-2977 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2997-3947 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3944-4354 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4367-5206 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5226-6365 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6358-8160 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 8165-9574 bp Gene: unk Type: unknown Location: 9588-10067 bp Gene: cash17:cash17 Type: Type- Location: 10064-11491 bp Gene: unk Type: unknown Location: 11536-12315 bp Gene: unk Type: unknown Location: 12291-12917 bp Gene: cls000004:cas6 Type: other Location: 12935-13603 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)