CRISPRone

CRISPRone report for SRR9713527

♦ Seq 1: NODE_2_length_352003_cov_9.731577

⇒Summary: seq-len = 352003 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 203963-207576 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 203963-204862 bp Gene: unk Type: unknown Location: 204859-206124 bp Gene: unk Type: unknown Location: 206132-206905 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 206908-207576 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_35_length_32591_cov_9.048807

⇒Summary: seq-len = 32591 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 5-960 bp Zoom in on locus 1 x14 CRISPR array Location: 5-960 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 5-960 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 5-960 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_1_length_353289_cov_9.009283

⇒Summary: seq-len = 353289 bp; # of CRISPR array = 0; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 757-13653 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 757-3027 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 3047-3997 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3994-4404 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4417-5256 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5276-6415 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6408-8210 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 8215-9624 bp Gene: unk Type: unknown Location: 9638-10117 bp Gene: cash17:cash17 Type: Type- Location: 10114-11541 bp Gene: unk Type: unknown Location: 11586-12365 bp Gene: unk Type: unknown Location: 12341-12967 bp Gene: cls000004:cas6 Type: other Location: 12985-13653 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)