CRISPRone

CRISPRone report for SRR9713528

♦ Seq 1: NODE_6_length_204591_cov_8.584821

⇒Summary: seq-len = 204591 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 73903-77516 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 73903-74571 bp Gene: unk Type: unknown Location: 74574-75347 bp Gene: unk Type: unknown Location: 75355-76620 bp Gene: pfam13280:WYL Type: other Location: 76617-77516 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_11_length_180534_cov_7.707334

⇒Summary: seq-len = 180534 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 134257-148903 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 134257-134988 bp Gene: unk Type: unknown Location: 135006-135632 bp Gene: unk Type: unknown Location: 135608-136387 bp Gene: cash17:cash17 Type: Type- Location: 136432-137859 bp Gene: unk Type: unknown Location: 137856-138335 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 138349-139758 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 139763-141565 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 141558-142697 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 142717-143556 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 143569-143979 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 143976-144926 bp Gene: cd09634:cas1 Type: universal Location: 144946-147216 bp Gene: cd09725:cas2 Type: universal Location: 147210-147500 bp CRISPR array Location: 147948-148903 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 147948-148903 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 147948-148903 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)