CRISPRone

CRISPRone report for SRR9713529

♦ Seq 1: NODE_4_length_224167_cov_6.788637

⇒Summary: seq-len = 224167 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 143528-147141 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 143528-144196 bp Gene: unk Type: unknown Location: 144199-144972 bp Gene: unk Type: unknown Location: 144980-146245 bp Gene: pfam13280:WYL Type: other Location: 146242-147141 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_10_length_142489_cov_6.084250

⇒Summary: seq-len = 142489 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 96212-110858 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 96212-96943 bp Gene: unk Type: unknown Location: 96961-97587 bp Gene: unk Type: unknown Location: 97563-98342 bp Gene: cash17:cash17 Type: Type- Location: 98387-99814 bp Gene: unk Type: unknown Location: 99811-100290 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 100304-101713 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 101718-103520 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 103513-104652 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 104672-105511 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 105524-105934 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 105931-106881 bp Gene: cd09634:cas1 Type: universal Location: 106901-109171 bp Gene: cd09725:cas2 Type: universal Location: 109165-109455 bp CRISPR array Location: 109903-110858 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 109903-110858 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 109903-110858 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)