CRISPRone

CRISPRone report for SRR9713543

♦ Seq 1: NODE_7_length_111383_cov_7.472639

⇒Summary: seq-len = 111383 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 94195-97808 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 94195-95094 bp Gene: unk Type: unknown Location: 95091-96356 bp Gene: unk Type: unknown Location: 96364-97137 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 97140-97808 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_26_length_60975_cov_6.429071

⇒Summary: seq-len = 60975 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 14698-29344 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 14698-15429 bp Gene: unk Type: unknown Location: 15447-16073 bp Gene: unk Type: unknown Location: 16049-16828 bp Gene: cash17:cash17 Type: Type- Location: 16873-18300 bp Gene: unk Type: unknown Location: 18297-18776 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 18790-20199 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 20204-22006 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 21999-23138 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 23158-23997 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 24010-24420 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 24417-25367 bp Gene: cd09634:cas1 Type: universal Location: 25387-27657 bp Gene: cd09725:cas2 Type: universal Location: 27651-27941 bp CRISPR array Location: 28389-29344 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 28389-29344 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 28389-29344 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)