CRISPRone

CRISPRone report for SRR9713545

♦ Seq 1: NODE_3_length_207203_cov_7.256300

⇒Summary: seq-len = 207203 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 26368-29981 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 26368-27036 bp Gene: unk Type: unknown Location: 27039-27812 bp Gene: unk Type: unknown Location: 27820-29085 bp Gene: pfam13280:WYL Type: other Location: 29082-29981 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_83_length_8997_cov_6.831022

⇒Summary: seq-len = 8997 bp; # of CRISPR array = 0; # of cas gene = 7  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 377-8995 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 377-2647 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2667-3611 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3614-4024 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4037-4876 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 4896-6035 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6028-7830 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 7835-8995 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_138_length_262_cov_4.077295

⇒Summary: seq-len = 262 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 32-207 bp Zoom in on locus 1 x3 CRISPR array Location: 32-207 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 32-207 bp Num of repeats: 3 Spacers: s1-s2 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 32-207 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NODE_56_length_32451_cov_6.866527

⇒Summary: seq-len = 32451 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 6-820 bp Zoom in on locus 1 x12 CRISPR array Location: 6-820 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 6-820 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 6-820 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)