CRISPRone

CRISPRone report for SRR9713546

♦ Seq 1: NODE_15_length_76972_cov_5.720504

⇒Summary: seq-len = 76972 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 30695-45341 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 30695-31426 bp Gene: unk Type: unknown Location: 31444-32070 bp Gene: unk Type: unknown Location: 32046-32825 bp Gene: cash17:cash17 Type: Type- Location: 32870-34297 bp Gene: unk Type: unknown Location: 34294-34773 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 34787-36196 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 36201-38003 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 37996-39135 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 39155-39994 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 40007-40417 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 40414-41364 bp Gene: cd09634:cas1 Type: universal Location: 41384-43654 bp Gene: cd09725:cas2 Type: universal Location: 43648-43938 bp CRISPR array Location: 44386-45341 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 44386-45341 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 44386-45341 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_2_length_148563_cov_5.814852

⇒Summary: seq-len = 148563 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 51547-55160 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 51547-52215 bp Gene: unk Type: unknown Location: 52218-52991 bp Gene: unk Type: unknown Location: 52999-54264 bp Gene: pfam13280:WYL Type: other Location: 54261-55160 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)