CRISPRone

CRISPRone report for SRR9713547

♦ Seq 1: NODE_54_length_32609_cov_7.116883

⇒Summary: seq-len = 32609 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 23-978 bp Zoom in on locus 1 x14 CRISPR array Location: 23-978 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 23-978 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 23-978 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_48_length_34197_cov_7.071642

⇒Summary: seq-len = 34197 bp; # of CRISPR array = 0; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 763-13659 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 763-3033 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 3053-4003 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 4000-4410 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4423-5262 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5282-6421 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6414-8216 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 8221-9630 bp Gene: unk Type: unknown Location: 9644-10123 bp Gene: cash17:cash17 Type: Type- Location: 10120-11547 bp Gene: unk Type: unknown Location: 11592-12371 bp Gene: unk Type: unknown Location: 12347-12973 bp Gene: cls000004:cas6 Type: other Location: 12991-13659 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_1_length_502402_cov_7.980293

⇒Summary: seq-len = 502402 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 354362-357975 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 354362-355261 bp Gene: unk Type: unknown Location: 355258-356523 bp Gene: unk Type: unknown Location: 356531-357304 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 357307-357975 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)