CRISPRone

CRISPRone report for SRR9713549

♦ Seq 1: NODE_9_length_168966_cov_7.607492

⇒Summary: seq-len = 168966 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 56-1011 bp Zoom in on locus 1 x14 CRISPR array Location: 56-1011 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 56-1011 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 56-1011 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_7_length_188526_cov_8.004287

⇒Summary: seq-len = 188526 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 143864-147477 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 143864-144532 bp Gene: unk Type: unknown Location: 144535-145308 bp Gene: unk Type: unknown Location: 145316-146581 bp Gene: pfam13280:WYL Type: other Location: 146578-147477 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_26_length_58690_cov_7.654438

⇒Summary: seq-len = 58690 bp; # of CRISPR array = 0; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 696-13592 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 696-2966 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2986-3936 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3933-4343 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4356-5195 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5215-6354 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6347-8149 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 8154-9563 bp Gene: unk Type: unknown Location: 9577-10056 bp Gene: cash17:cash17 Type: Type- Location: 10053-11480 bp Gene: unk Type: unknown Location: 11525-12304 bp Gene: unk Type: unknown Location: 12280-12906 bp Gene: cls000004:cas6 Type: other Location: 12924-13592 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)