CRISPRone

CRISPRone report for SRR9713552

♦ Seq 1: NODE_67_length_25425_cov_6.821876

⇒Summary: seq-len = 25425 bp; # of CRISPR array = 1; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-2912 bp Zoom in on locus 1 x14 Gene: cd09634:cas1 Type: universal Location: 2-1225 bp Gene: cd09725:cas2 Type: universal Location: 1219-1509 bp CRISPR array Location: 1957-2912 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 1957-2912 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1957-2912 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_70_length_24904_cov_6.529237

⇒Summary: seq-len = 24904 bp; # of CRISPR array = 0; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-11685 bp Zoom in on locus 1 Gene: pfam00078:RT Type: other Location: 1-1059 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 1079-2029 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 2026-2436 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2449-3288 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 3308-4447 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 4440-6242 bp Gene: unk Type: unknown Location: 6247-6378 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 6385-7656 bp Gene: unk Type: unknown Location: 7670-8149 bp Gene: cash17:cash17 Type: Type- Location: 8146-9573 bp Gene: unk Type: unknown Location: 9618-10397 bp Gene: unk Type: unknown Location: 10373-10999 bp Gene: cls000004:cas6 Type: other Location: 11017-11685 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_5_length_159225_cov_7.425407

⇒Summary: seq-len = 159225 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 81734-85347 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 81734-82633 bp Gene: unk Type: unknown Location: 82630-83895 bp Gene: unk Type: unknown Location: 83903-84676 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 84679-85347 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)