CRISPRone

CRISPRone report for SRR9713560

♦ Seq 1: NODE_7_length_223367_cov_12.505553

⇒Summary: seq-len = 223367 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 964-9191 bp Zoom in on locus 1 x20 CRISPR array Location: 964-2469 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 964-2469 bp Num of repeats: 20 Spacers: s1-s19 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 2578-2910 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 2914-3846 bp Gene: unk Type: unknown Location: 3966-4274 bp Gene: unk Type: unknown Location: 4341-4865 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 4881-9191 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 964-2469 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_5_length_300616_cov_11.190068

⇒Summary: seq-len = 300616 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 96350-99963 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 96350-97018 bp Gene: unk Type: unknown Location: 97021-97794 bp Gene: unk Type: unknown Location: 97802-99067 bp Gene: pfam13280:WYL Type: other Location: 99064-99963 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_6_length_272921_cov_10.503405

⇒Summary: seq-len = 272921 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 80440-90158 bp Zoom in on locus 1 Gene: cd09710:cas3 Type: Subtype-I-D Location: 80440-86580 bp Gene: pfam13280:WYL Type: other Location: 86619-87629 bp Gene: unk Type: unknown Location: 88395-88571 bp Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 88908-90158 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)