CRISPRone

CRISPRone report for SRR9713565

♦ Seq 1: NODE_41_length_34985_cov_6.543229

⇒Summary: seq-len = 34985 bp; # of CRISPR array = 0; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 690-13586 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 690-2960 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2980-3930 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3927-4337 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4350-5189 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5209-6348 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6341-8143 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 8148-9557 bp Gene: unk Type: unknown Location: 9571-10050 bp Gene: cash17:cash17 Type: Type- Location: 10047-11474 bp Gene: unk Type: unknown Location: 11519-12298 bp Gene: unk Type: unknown Location: 12274-12900 bp Gene: cls000004:cas6 Type: other Location: 12918-13586 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_1_length_523792_cov_7.405465

⇒Summary: seq-len = 523792 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 376633-380246 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 376633-377532 bp Gene: unk Type: unknown Location: 377529-378794 bp Gene: unk Type: unknown Location: 378802-379575 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 379578-380246 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_46_length_32645_cov_7.037834

⇒Summary: seq-len = 32645 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31633-32587 bp Zoom in on locus 1 x14 CRISPR array Location: 31633-32587 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 31633-32587 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 31633-32587 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)