CRISPRone

CRISPRone report for SRR9713567

♦ Seq 1: NODE_11_length_168499_cov_11.097308

⇒Summary: seq-len = 168499 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 84128-87741 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 84128-85027 bp Gene: unk Type: unknown Location: 85024-86289 bp Gene: unk Type: unknown Location: 86297-87070 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 87073-87741 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_4_length_386886_cov_10.008293

⇒Summary: seq-len = 386886 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 340609-355255 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 340609-341340 bp Gene: unk Type: unknown Location: 341358-341984 bp Gene: unk Type: unknown Location: 341960-342739 bp Gene: cash17:cash17 Type: Type- Location: 342784-344211 bp Gene: unk Type: unknown Location: 344208-344687 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 344701-346110 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 346115-347917 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 347910-349049 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 349069-349908 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 349921-350331 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 350328-351278 bp Gene: cd09634:cas1 Type: universal Location: 351298-353568 bp Gene: cd09725:cas2 Type: universal Location: 353562-353852 bp CRISPR array Location: 354300-355255 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 354300-355255 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 354300-355255 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)