CRISPRone

CRISPRone report for SRR9713568

♦ Seq 1: NODE_25_length_61307_cov_10.274816

⇒Summary: seq-len = 61307 bp; # of CRISPR array = 0; # of cas gene = 7  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 51513-61235 bp Zoom in on locus 1 Gene: cls000004:cas6 Type: other Location: 51513-52244 bp Gene: unk Type: unknown Location: 52262-52888 bp Gene: unk Type: unknown Location: 52864-53643 bp Gene: cash17:cash17 Type: Type- Location: 53688-55115 bp Gene: unk Type: unknown Location: 55112-55591 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 55605-57014 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 57019-58821 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 58814-59953 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 59973-60812 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 60825-61235 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_35_length_36492_cov_10.888932

⇒Summary: seq-len = 36492 bp; # of CRISPR array = 1; # of cas gene = 3  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-4861 bp Zoom in on locus 1 x14 Gene: pfam03787:csm3gr7 Type: Type-III Location: 3-884 bp Gene: cd09634:cas1 Type: universal Location: 904-3174 bp Gene: cd09725:cas2 Type: universal Location: 3168-3458 bp CRISPR array Location: 3906-4861 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 3906-4861 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 3906-4861 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_1_length_505815_cov_12.188344

⇒Summary: seq-len = 505815 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 357775-361388 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 357775-358674 bp Gene: unk Type: unknown Location: 358671-359936 bp Gene: unk Type: unknown Location: 359944-360717 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 360720-361388 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)