CRISPRone

CRISPRone report for SRR9713570

♦ Seq 1: NODE_50_length_26991_cov_5.836464

⇒Summary: seq-len = 26991 bp; # of CRISPR array = 1; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4883-19529 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 4883-5614 bp Gene: unk Type: unknown Location: 5632-6258 bp Gene: unk Type: unknown Location: 6234-7013 bp Gene: cash17:cash17 Type: Type- Location: 7058-8485 bp Gene: unk Type: unknown Location: 8482-8961 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 8975-10384 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 10389-12191 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 12184-13323 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 13343-14182 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 14195-14605 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 14602-15552 bp Gene: cd09634:cas1 Type: universal Location: 15572-17842 bp CRISPR array Location: 18574-19529 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 18574-19529 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 18574-19529 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_2_length_428415_cov_6.607921

⇒Summary: seq-len = 428415 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 48170-51783 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 48170-48838 bp Gene: unk Type: unknown Location: 48841-49614 bp Gene: unk Type: unknown Location: 49622-50887 bp Gene: pfam13280:WYL Type: other Location: 50884-51783 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)