CRISPRone

CRISPRone report for SRR9713572

♦ Seq 1: NODE_13_length_80564_cov_5.510788

⇒Summary: seq-len = 80564 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 63282-66895 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 63282-64181 bp Gene: unk Type: unknown Location: 64178-65443 bp Gene: unk Type: unknown Location: 65451-66224 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 66227-66895 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_9_length_103298_cov_4.979941

⇒Summary: seq-len = 103298 bp; # of CRISPR array = 1; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 26709-41291 bp Zoom in on locus 1 x14 CRISPR array Location: 26709-27663 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 26709-27663 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09634:cas1 Type: universal Location: 28395-30665 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 30685-31635 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 31632-32042 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 32055-32894 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 32914-34053 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 34046-35848 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 35853-37262 bp Gene: unk Type: unknown Location: 37276-37755 bp Gene: cash17:cash17 Type: Type- Location: 37752-39179 bp Gene: unk Type: unknown Location: 39224-40003 bp Gene: unk Type: unknown Location: 39979-40605 bp Gene: cls000004:cas6 Type: other Location: 40623-41291 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 26709-27663 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)