CRISPRone

CRISPRone report for SRR9713573

♦ Seq 1: NODE_2_length_523836_cov_10.664873

⇒Summary: seq-len = 523836 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 143591-147204 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 143591-144259 bp Gene: unk Type: unknown Location: 144262-145035 bp Gene: unk Type: unknown Location: 145043-146308 bp Gene: pfam13280:WYL Type: other Location: 146305-147204 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_35_length_32638_cov_9.643157

⇒Summary: seq-len = 32638 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31633-32587 bp Zoom in on locus 1 x14 CRISPR array Location: 31633-32587 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 31633-32587 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 31633-32587 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_1_length_710659_cov_9.145289

⇒Summary: seq-len = 710659 bp; # of CRISPR array = 0; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 697007-710250 bp Zoom in on locus 1 Gene: cls000004:cas6 Type: other Location: 697007-697738 bp Gene: unk Type: unknown Location: 697756-698382 bp Gene: unk Type: unknown Location: 698358-699137 bp Gene: cash17:cash17 Type: Type- Location: 699182-700609 bp Gene: unk Type: unknown Location: 700606-701085 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 701099-702508 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 702513-704315 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 704308-705447 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 705467-706306 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 706319-706729 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 706726-707676 bp Gene: cd09634:cas1 Type: universal Location: 707696-709966 bp Gene: cd09725:cas2 Type: universal Location: 709960-710250 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)