CRISPRone

CRISPRone report for SRR9713586

♦ Seq 1: NODE_133_length_12624_cov_4.817408

⇒Summary: seq-len = 12624 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 24-3637 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 24-692 bp Gene: unk Type: unknown Location: 695-1468 bp Gene: unk Type: unknown Location: 1476-2741 bp Gene: pfam13280:WYL Type: other Location: 2738-3637 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_148_length_11421_cov_3.650801

⇒Summary: seq-len = 11421 bp; # of CRISPR array = 0; # of cas gene = 8  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-10739 bp Zoom in on locus 1 Gene: cash17:cash17 Type: Type- Location: 3-1382 bp Gene: unk Type: unknown Location: 1379-1858 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 1872-3281 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 3286-5088 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5081-6220 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 6240-7079 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 7092-7502 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 7505-8449 bp Gene: cd09634:cas1 Type: universal Location: 8469-10739 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_205_length_9120_cov_4.717264

⇒Summary: seq-len = 9120 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 59-1014 bp Zoom in on locus 1 x14 CRISPR array Location: 59-1014 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 59-1014 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 59-1014 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)