CRISPRone

CRISPRone report for SRR9713587

♦ Seq 1: NODE_58_length_32642_cov_6.033633

⇒Summary: seq-len = 32642 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 56-1011 bp Zoom in on locus 1 x14 CRISPR array Location: 56-1011 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 56-1011 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 56-1011 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_189_length_1900_cov_4.405962

⇒Summary: seq-len = 1900 bp; # of CRISPR array = 0; # of cas gene = 1  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 108-1898 bp Zoom in on locus 1 Gene: pfam12469:cas10 Type: Subtype-III-B Location: 108-1898 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_139_length_6141_cov_5.686494

⇒Summary: seq-len = 6141 bp; # of CRISPR array = 0; # of cas gene = 5  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 463-6121 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 463-2733 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2753-3697 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3700-4110 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4123-4962 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 4982-6121 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NODE_10_length_99653_cov_7.137603

⇒Summary: seq-len = 99653 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 14353-17966 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 14353-15021 bp Gene: unk Type: unknown Location: 15024-15797 bp Gene: unk Type: unknown Location: 15805-17070 bp Gene: pfam13280:WYL Type: other Location: 17067-17966 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)