CRISPRone

CRISPRone report for SRR9713598

♦ Seq 1: NODE_7_length_221533_cov_14.966832

⇒Summary: seq-len = 221533 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 118798-122411 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 118798-119697 bp Gene: unk Type: unknown Location: 119694-120959 bp Gene: unk Type: unknown Location: 120967-121740 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 121743-122411 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_16_length_113530_cov_13.322741

⇒Summary: seq-len = 113530 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 66832-81883 bp Zoom in on locus 1 x20 Gene: cls000004:cas6 Type: other Location: 66832-67563 bp Gene: unk Type: unknown Location: 67581-68207 bp Gene: unk Type: unknown Location: 68183-68962 bp Gene: cash17:cash17 Type: Type- Location: 69007-70434 bp Gene: unk Type: unknown Location: 70431-70910 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 70924-72333 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 72338-74140 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 74133-75272 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 75292-76131 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 76144-76554 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 76551-77501 bp Gene: cd09634:cas1 Type: universal Location: 77521-79791 bp Gene: cd09725:cas2 Type: universal Location: 79785-80075 bp CRISPR array Location: 80523-81883 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 80523-81883 bp Num of repeats: 20 Spacers: s1-s19 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 80523-81883 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)