CRISPRone

CRISPRone report for SRR9713611

♦ Seq 1: NODE_14_length_141107_cov_31.396230

⇒Summary: seq-len = 141107 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 95491-110129 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 95491-96222 bp Gene: unk Type: unknown Location: 96240-96866 bp Gene: unk Type: unknown Location: 96842-97621 bp Gene: cash17:cash17 Type: Type- Location: 97666-99093 bp Gene: unk Type: unknown Location: 99090-99569 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 99583-100992 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 100997-102799 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 102792-103931 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 103951-104790 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 104803-105213 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 105210-106160 bp Gene: cd09634:cas1 Type: universal Location: 106180-108450 bp Gene: cd09725:cas2 Type: universal Location: 108444-108734 bp CRISPR array Location: 109182-110129 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 109182-110129 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 109182-110129 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_1_length_454277_cov_33.049258

⇒Summary: seq-len = 454277 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 346575-350188 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 346575-347474 bp Gene: unk Type: unknown Location: 347471-348736 bp Gene: unk Type: unknown Location: 348744-349517 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 349520-350188 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)