CRISPRone

CRISPRone report for SRR9713612

♦ Seq 1: NODE_3_length_477996_cov_27.609176

⇒Summary: seq-len = 477996 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 104090-107703 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 104090-104758 bp Gene: unk Type: unknown Location: 104761-105534 bp Gene: unk Type: unknown Location: 105542-106807 bp Gene: pfam13280:WYL Type: other Location: 106804-107703 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_1_length_672993_cov_24.006751

⇒Summary: seq-len = 672993 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 627377-642015 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 627377-628108 bp Gene: unk Type: unknown Location: 628126-628752 bp Gene: unk Type: unknown Location: 628728-629507 bp Gene: cash17:cash17 Type: Type- Location: 629552-630979 bp Gene: unk Type: unknown Location: 630976-631455 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 631469-632878 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 632883-634685 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 634678-635817 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 635837-636676 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 636689-637099 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 637096-638046 bp Gene: cd09634:cas1 Type: universal Location: 638066-640336 bp Gene: cd09725:cas2 Type: universal Location: 640330-640620 bp CRISPR array Location: 641068-642015 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 641068-642015 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 641068-642015 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)