CRISPRone

CRISPRone report for SRR9713620

♦ Seq 1: NODE_194_length_8128_cov_3.817912

⇒Summary: seq-len = 8128 bp; # of CRISPR array = 0; # of cas gene = 6  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 763-8126 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 763-3033 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 3053-3997 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 4000-4410 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4423-5262 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5282-6421 bp Gene: cls000742:cas10 Type: Type-III Location: 6414-8126 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_277_length_6129_cov_3.468390

⇒Summary: seq-len = 6129 bp; # of CRISPR array = 0; # of cas gene = 3  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 98-5536 bp Zoom in on locus 1 Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 98-1507 bp Gene: unk Type: unknown Location: 1521-2000 bp Gene: cash17:cash17 Type: Type- Location: 1997-3424 bp Gene: unk Type: unknown Location: 3469-4248 bp Gene: unk Type: unknown Location: 4224-4850 bp Gene: cls000004:cas6 Type: other Location: 4868-5536 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_47_length_17179_cov_4.009986

⇒Summary: seq-len = 17179 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 10706-14319 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 10706-11605 bp Gene: unk Type: unknown Location: 11602-12867 bp Gene: unk Type: unknown Location: 12875-13648 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 13651-14319 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NODE_587_length_2307_cov_3.175844

⇒Summary: seq-len = 2307 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 9-964 bp Zoom in on locus 1 x14 CRISPR array Location: 9-964 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 9-964 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 9-964 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)