CRISPRone

CRISPRone report for SRR9713621

♦ Seq 1: NODE_151_length_11736_cov_6.961390

⇒Summary: seq-len = 11736 bp; # of CRISPR array = 0; # of cas gene = 8  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 358-11142 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 358-2628 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2648-3592 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3595-4005 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4018-4857 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 4877-6016 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6009-7811 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 7816-9225 bp Gene: unk Type: unknown Location: 9239-9718 bp Gene: cash17:cash17 Type: Type- Location: 9715-11142 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_64_length_27760_cov_7.447753

⇒Summary: seq-len = 27760 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 281-1236 bp Zoom in on locus 1 x14 CRISPR array Location: 281-1236 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 281-1236 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 281-1236 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)