CRISPRone

CRISPRone report for SRR9713624

♦ Seq 1: NODE_104_length_15622_cov_3.824308

⇒Summary: seq-len = 15622 bp; # of CRISPR array = 1; # of cas gene = 7  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-9567 bp Zoom in on locus 1 x14 Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 3-422 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 427-2229 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 2222-3361 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 3381-4220 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 4233-4643 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4640-5590 bp Gene: cd09634:cas1 Type: universal Location: 5610-7880 bp CRISPR array Location: 8612-9567 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 8612-9567 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8612-9567 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_112_length_14864_cov_4.465730

⇒Summary: seq-len = 14864 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 10690-14303 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 10690-11589 bp Gene: unk Type: unknown Location: 11586-12851 bp Gene: unk Type: unknown Location: 12859-13632 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 13635-14303 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)